Basic Information
Locus ID:
gene.Posoc09g01100
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
CMT1
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 64101415 | 64179645 | + | gene.Posoc09g01100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 106,779.19 Da | 42.80 | 72.17 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 496 | 552 | 1.82266E-29 | - |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 497 | 552 | 1.1E-9 | IPR023780 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 561 | 922 | 8.8E-35 | IPR001525 |
| Pfam | PF01426 | BAH domain | 233 | 342 | 1.9E-9 | IPR001025 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 485 | 553 | 1.08E-11 | IPR016197 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 386 | 923 | 1.9E-75 | IPR029063 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 715 | 889 | 1.8E-209 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 368 | 478 | 8.9E-15 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 496 | 941 | 1.8E-209 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 168 | 331 | 1.6E-46 | IPR043151 |
| SMART | SM00439 | BAH_4 | 230 | 346 | 2.7E-17 | IPR001025 |
| SMART | SM00298 | chromo_7 | 496 | 555 | 1.7E-9 | IPR000953 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 230 | 346 | 17.754589 | IPR001025 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 497 | 553 | 11.942101 | IPR000953 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 387 | 930 | 45.069553 | IPR001525 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 567 | 579 | - | IPR018117 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 520 | 540 | - | IPR023779 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 656 | 669 | 3.1E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 388 | 404 | 3.1E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 610 | 624 | 3.1E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 163 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_008790945.1 | DNA (cytosine-5)-methyltransferase CMT2-like isoform X1 [Phoenix dactylifera] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1YKA9 | DNA (Cytosine-5)-methyltransferase CMT2 OS=Anthurium amnicola OX=1678845 GN=CMT2_5 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology