Basic Information
Locus ID:
gene.Posoc09g00820
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 47204715 | 47213139 | - | gene.Posoc09g00820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 170,147.34 Da | 41.31 | 107.54 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03250 | ABCC_MRP_domain1 | 632 | 832 | 3.10766E-107 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 318 | 606 | 1.13635E-97 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 950 | 1244 | 3.6246E-90 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1267 | 1487 | 2.84997E-124 | - |
| Pfam | PF00005 | ABC transporter | 650 | 784 | 2.1E-17 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1287 | 1434 | 1.7E-27 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 985 | 1196 | 9.1E-30 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 320 | 585 | 1.6E-28 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 938 | 1247 | 1.44E-46 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1261 | 1494 | 3.37E-65 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 626 | 846 | 1.13E-54 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 312 | 614 | 3.53E-34 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 630 | 861 | 1.1E-67 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 297 | 615 | 8.7E-49 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1252 | 1504 | 8.5E-80 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 916 | 1250 | 6.9E-53 | IPR036640 |
| SMART | SM00382 | AAA_5 | 659 | 832 | 1.0E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1295 | 1487 | 1.5E-12 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 952 | 1232 | 32.856194 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 632 | 855 | 22.202324 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 320 | 598 | 34.500904 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1271 | 1503 | 16.533419 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 757 | 771 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 885 | - | - |
| Coils | Coil | Coil | 1524 | 1526 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_038975230.1 | putative ABC transporter C family member 15 [Phoenix dactylifera] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1Z236 | ABC transporter C family member 9 OS=Anthurium amnicola OX=1678845 GN=ABCC9_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology