Basic Information
Locus ID:
gene.Posoc08g14390
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Thiamine pyrophosphate enzyme, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 190054158 | 190059345 | - | gene.Posoc08g14390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 62,961.90 Da | 33.43 | 92.25 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 22 | 182 | 5.35645E-88 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 380 | 562 | 9.49797E-89 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 215 | 330 | 1.1E-22 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 18 | 185 | 1.0E-34 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 425 | 549 | 4.1E-17 | IPR011766 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 210 | 356 | 1.13E-32 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 380 | 574 | 4.29E-44 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 18 | 194 | 3.05E-42 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 373 | 561 | 4.5E-58 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 16 | 192 | 2.5E-58 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 204 | 367 | 1.5E-40 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 15 | 574 | 2.3E-207 | IPR012110 |
| Coils | Coil | Coil | 523 | 543 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_010912563.1 | pyruvate decarboxylase 1 [Elaeis guineensis] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9QNS4 | pyruvate decarboxylase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105038446 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology