Basic Information
Locus ID:
gene.Posoc08g13670
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Possibly involved in carbohydrate binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 187095797 | 187099786 | + | gene.Posoc08g13670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 46,154.29 Da | 47.68 | 76.58 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 115 | 269 | 8.72E-10 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 48 | 271 | 2.1E-15 | IPR036397 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 278 | 390 | 3.0E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_028060369.1 | glucan endo-1,3-beta-glucosidase 1 [Camellia sinensis] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q3M0 | Beta-1,3-endoglucanase, family GH17 OS=Zostera marina OX=29655 GN=ZOSMA_10G00420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 7 | gene.Posoc02g00920, gene.Posoc02g00940, gene.Posoc05g17300 ... |