halophFGD

Basic Information

Locus ID: gene.Posoc08g13350

Species & Taxonomic ID: Posidonia oceanica & 55489

Genome Assembly: GCA_037176725.1

Description: F-box kelch-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr08	185742057	185742575	+	gene.Posoc08g13350

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.46	20,113.40 Da	33.56	76.98	-0.37

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	5	49	7.6E-8	IPR001810
SUPERFAMILY	SSF81383	F-box domain	3	64	4.84E-9	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	5	45	7.0E-7	-
ProSiteProfiles	PS50181	F-box domain profile.	3	50	9.179537	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_020270850.1	F-box protein At2g26160-like [Asparagus officinalis]	0
TrEMBL	A0A5P1ELZ3	DUF295 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F12150 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	4	Ag11G04177, Ag4G02090, Ag8G00526, Ag9G00673
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG12.961
Plantaginaceae	Plantago ovata	1	Pov_00014702
Posidoniaceae	Posidonia oceanica	1	gene.Posoc08g13350
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-13710