Basic Information
Locus ID:
gene.Posoc08g13080
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 184696256 | 184699963 | - | gene.Posoc08g13080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 30,731.47 Da | 32.57 | 65.91 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 27 | 277 | 4.6E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 162 | 267 | 6.38E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 160 | 280 | 7.2E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 166 | 268 | 25.128296 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 130 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_010917562.1 | auxin-responsive protein IAA27 [Elaeis guineensis] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1YDJ7 | Auxin-responsive protein OS=Anthurium amnicola OX=1678845 GN=IAA27_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology