Basic Information
Locus ID:
gene.Posoc08g12640
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 180889040 | 180892319 | + | gene.Posoc08g12640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 27,840.71 Da | 42.54 | 94.77 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 57 | 99 | 5.2E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 179 | 248 | 6.93E-10 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 128 | 2.89E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 174 | 253 | 3.7E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 128 | 1.5E-21 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 65 | 78 | 3.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 86 | 99 | 3.3E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51830.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010244372.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180 [Nelumbo nucifera] | 0 |
| C0LGG3 | Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana OX=3702 GN=At1g51820 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7YVA4 | probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Nelumbo nucifera OX=4432 GN=LOC104588225 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0532990 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057047 |
| Poaceae | Oryza coarctata | 1 | Oco21G010000 |
| Poaceae | Oryza sativa | 2 | LOC_Os09g17890.1, LOC_Os09g22300.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G552100 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13861 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc05g10600, gene.Posoc08g12640 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-21362, nbisL1-mrna-24214, nbisL1-mrna-24215 ... |
| Zosteraceae | Zostera marina | 1 | Zosma02g14880.v3.1 |