Basic Information
Locus ID:
gene.Posoc08g10450
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 167628356 | 167639774 | - | gene.Posoc08g10450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 96,372.43 Da | 52.03 | 77.39 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 642 | 676 | 9.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 728 | 760 | 0.0056 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 550 | 862 | 1.83E-52 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 319 | 1.05E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 93 | 325 | 9.6E-22 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 529 | 865 | 2.7E-120 | IPR015943 |
| SMART | SM00320 | WD40_4 | 636 | 676 | 3.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 722 | 760 | 2.6E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 769 | 808 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 824 | 863 | 48.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 589 | 633 | 45.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 544 | 583 | 2.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 679 | 718 | 5.7E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 643 | 685 | 12.313033 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 729 | 762 | 10.811958 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 314 | 9.3334 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 729 | 762 | 13.014815 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 643 | 678 | 10.126507 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 747 | 761 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 663 | 677 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 747 | 761 | 1.6E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 620 | 634 | 1.6E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 663 | 677 | 1.6E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_010260211.1 | PREDICTED: protein SPA1-RELATED 3-like isoform X2 [Nelumbo nucifera] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1YT62 | Protein SPA1-RELATED 3 OS=Anthurium amnicola OX=1678845 GN=SPA3_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology