Basic Information
Locus ID:
gene.Posoc08g10010
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 161944466 | 161948975 | - | gene.Posoc08g10010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 74,915.74 Da | 55.47 | 97.62 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 1.7E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 1.6E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 385 | 636 | 5.7E-23 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 174 | 2.17E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 636 | 1.93E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 455 | 645 | 1.7E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 454 | 5.0E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 254 | 1.9E-41 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 640 | 18.308489 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008789989.3 | protein MALE DISCOVERER 2-like isoform X1 [Phoenix dactylifera] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843TVB9 | Protein kinase domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_007827 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology