halophFGD

Basic Information

Locus ID: gene.Posoc08g09780

Species & Taxonomic ID: Posidonia oceanica & 55489

Genome Assembly: GCA_037176725.1

Short Name: MTSSB

Description: Single-strand binding protein family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr08	160872525	160887017	-	gene.Posoc08g09780

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.19	32,427.93 Da	62.97	71.99	-0.57

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00436	Single-strand binding protein family	226	285	3.9E-9	IPR000424
SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	227	288	8.14E-8	IPR012340
Gene3D	G3DSA:2.40.50.140	-	222	290	1.0E-8	-
MobiDBLite	mobidb-lite	consensus disorder prediction	10	35	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	35	-	-

Gene Ontology

Molecular Function:

GO:0003697 (single-stranded DNA binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G11060.1	mitochondrially targeted single-stranded DNA binding protein.
RefSeq	XP_010918114.1	single-stranded DNA-binding protein, mitochondrial isoform X2 [Elaeis guineensis]
Swiss-Prot	Q84J78	Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1
TrEMBL	A0A6I9R1N8	single-stranded DNA-binding protein, mitochondrial isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105042545 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Posidoniaceae	Posidonia oceanica	37	gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... gene.Posoc01g29480, gene.Posoc01g33290, gene.Posoc02g00010, gene.Posoc02g01630, gene.Posoc02g10450, gene.Posoc02g14150, gene.Posoc02g16790, gene.Posoc02g17140, gene.Posoc02g17150, gene.Posoc03g20350, gene.Posoc03g22380, gene.Posoc03g25910, gene.Posoc04g02750, gene.Posoc04g03060, gene.Posoc04g12880, gene.Posoc04g19770, gene.Posoc05g21170, gene.Posoc06g09400, gene.Posoc06g16150, gene.Posoc06g22130, gene.Posoc07g00920, gene.Posoc07g06820, gene.Posoc07g09250, gene.Posoc08g04280, gene.Posoc08g05080, gene.Posoc08g07430, gene.Posoc08g08080, gene.Posoc08g09780, gene.Posoc08g12200, gene.Posoc09g03610, gene.Posoc09g08200, gene.Posoc10g06970, gene.Posoc10g06980, gene.Posoc10g06990