Basic Information
Locus ID:
gene.Posoc08g08770
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the cullin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 135545523 | 135546712 | - | gene.Posoc08g08770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 21,273.46 Da | 62.66 | 68.40 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 138 | 174 | 1.5E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 99 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69670.1 | cullin 3B. cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification. | 0 |
| RefSeq | XP_019093326.1 | PREDICTED: cullin-3B-like [Camelina sativa] | 0 |
| Q9C9L0 | Cullin-3B OS=Arabidopsis thaliana OX=3702 GN=CUL3B PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J7GVD8 | Cullin domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_14295 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_05G007000 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0079 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0070 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc08g08770 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-132 |
| Salicaceae | Populus euphratica | 1 | populus_peu21334 |