Basic Information
Locus ID:
gene.Posoc08g07470
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
C3HC zinc finger-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 77040032 | 77043170 | + | gene.Posoc08g07470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 45,180.77 Da | 31.62 | 92.27 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 270 | 382 | 7.83254E-25 | - |
| CDD | cd14003 | STKc_AMPK-like | 5 | 238 | 1.11466E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 9 | 220 | 1.2E-65 | IPR000719 |
| Pfam | PF03822 | NAF domain | 268 | 324 | 2.4E-13 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 226 | 4.72E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 87 | 266 | 1.4E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 85 | 2.5E-27 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 267 | 395 | 7.1E-27 | - |
| SMART | SM00220 | serkin_6 | 6 | 269 | 3.2E-77 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 6 | 269 | 44.979347 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 264 | 288 | 9.681134 | IPR018451 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 12 | 35 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30270.2 | - | 0 |
| RefSeq | XP_052182687.1 | CBL-interacting serine/threonine-protein kinase 23-like isoform X3 [Diospyros lotus] | 0 |
| Q6ZLP5 | CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK23 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1YXL7 | non-specific serine/threonine protein kinase OS=Anthurium amnicola OX=1678845 GN=CIPK23_4 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc03g00570, gene.Posoc08g07470, gene.Posoc09g07510 |