Basic Information
Locus ID:
gene.Posoc08g07300
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 74548873 | 74553218 | - | gene.Posoc08g07300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 71,814.35 Da | 49.20 | 94.94 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 26 | 113 | 2.0E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 213 | 477 | 3.5E-88 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 19 | 115 | 2.28E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 12 | 130 | 2.3E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 501 | 90.037117 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.915877 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 644 | - | - |
| Coils | Coil | Coil | 550 | 577 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_012075651.1 | BTB/POZ domain-containing protein At1g30440 isoform X1 [Jatropha curcas] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D1XMG1 | BTB/POZ domain-containing protein At1g30440 OS=Anthurium amnicola OX=1678845 GN=At1g30440_3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology