Basic Information
Locus ID:
gene.Posoc08g07150
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 73629944 | 73637990 | + | gene.Posoc08g07150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 46,223.58 Da | 33.98 | 84.10 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00983 | recA | 77 | 399 | 1.95808E-177 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 80 | 342 | 1.3E-113 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 79 | 341 | 7.65E-51 | IPR027417 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 342 | 399 | 1.57E-18 | IPR023400 |
| Gene3D | G3DSA:3.40.50.300 | - | 107 | 411 | 5.5E-101 | IPR027417 |
| SMART | SM00382 | AAA_5 | 129 | 300 | 9.1E-10 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 77 | 397 | 7.7E-140 | IPR013765 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 271 | 346 | 27.023129 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 108 | 266 | 25.565897 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 285 | 293 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 317 | 346 | 3.1E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 371 | 388 | 3.1E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 165 | 194 | 3.1E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 282 | 310 | 3.1E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 199 | 228 | 3.1E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 237 | 266 | 3.1E-75 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 78 | 403 | 44.060486 | IPR013765 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79050.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_010904644.1 | DNA repair protein recA homolog 1, chloroplastic [Elaeis guineensis] | 0 |
| Q39199 | DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECA PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BG69 | DNA repair protein recA homolog 1, chloroplastic OS=Phoenix dactylifera OX=42345 GN=LOC103696257 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology