Basic Information
Locus ID:
gene.Posoc08g04230
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 43422658 | 43459413 | - | gene.Posoc08g04230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 115,123.14 Da | 62.84 | 78.31 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 176 | 271 | 2.08226E-10 | - |
| CDD | cd00159 | RhoGAP | 337 | 475 | 1.6856E-23 | - |
| Pfam | PF00169 | PH domain | 174 | 279 | 9.7E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 337 | 480 | 1.2E-28 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 788 | 863 | 5.2E-17 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 336 | 529 | 4.51E-31 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 174 | 286 | 4.93E-16 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 160 | 281 | 7.4E-16 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 304 | 529 | 1.4E-39 | IPR008936 |
| SMART | SM00233 | PH_update | 174 | 282 | 6.7E-16 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 334 | 524 | 1.0E-23 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 173 | 280 | 14.9359 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 328 | 527 | 28.316652 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 858 | 913 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1018 | 1039 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 640 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 858 | 987 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 914 | 951 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 979 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 596 | - | - |
| Coils | Coil | Coil | 783 | 810 | - | - |
| Coils | Coil | Coil | 357 | 377 | - | - |
| Coils | Coil | Coil | 840 | 860 | - | - |
| Coils | Coil | Coil | 997 | 1024 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.4 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_008775345.2 | rho GTPase-activating protein 7-like isoform X2 [Phoenix dactylifera] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1Y130 | Rho GTPase-activating protein 15 OS=Anthurium amnicola OX=1678845 GN=ARHGAP15_1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology