Basic Information
Locus ID:
gene.Posoc08g03190
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 32789202 | 32798578 | - | gene.Posoc08g03190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 77,989.07 Da | 40.33 | 86.10 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 417 | 687 | 2.11936E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 684 | 6.4E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 1.7E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 140 | 199 | 1.4E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 684 | 3.01E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 236 | 1.56E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 488 | 3.7E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 254 | 9.7E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 711 | 1.6E-55 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 188 | 210 | 7.357723 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 687 | 35.085548 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 718 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_010273793.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Nelumbo nucifera] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NNS9 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Zostera marina OX=29655 GN=ZOSMA_84G00480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology