Basic Information
Locus ID:
gene.Posoc08g01580
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RNA recognition motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 8637887 | 8644435 | - | gene.Posoc08g01580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 26,542.31 Da | 57.68 | 65.46 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 169 | 233 | 4.8E-9 | IPR000504 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 161 | 232 | 3.53E-11 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 163 | 237 | 5.3E-13 | IPR012677 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 167 | 232 | 9.405087 | IPR000504 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 164 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21320.2 | nucleotide binding;nucleic acid binding. | 0 |
| RefSeq | XP_038982538.1 | protein MATERNALLY EXPRESSED GENE 5 isoform X7 [Phoenix dactylifera] | 0 |
| Q6JB11 | Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7I8K5S6 | RRM domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_02003118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology