Basic Information
Locus ID:
gene.Posoc08g00560
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 4050888 | 4057962 | - | gene.Posoc08g00560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 184,243.41 Da | 48.45 | 77.85 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1367 | 1630 | 5.29741E-135 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 327 | 603 | 2.11727E-116 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 347 | 591 | 5.5E-30 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1406 | 1572 | 6.4E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 393 | 569 | 2.46E-36 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1352 | 1630 | 1.5E-80 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 392 | 569 | 2.8E-47 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1489 | 1631 | 2.0E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1328 | 1487 | 5.4E-36 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1340 | 1631 | 7.3E-118 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 43 | 104 | 8.710241 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1306 | 1630 | 58.359814 | IPR002498 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_029122882.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform X2 [Elaeis guineensis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P8C7 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Zostera marina OX=29655 GN=ZOSMA_32G00730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology