Basic Information
Locus ID:
gene.Posoc08g00360
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 2737333 | 2739510 | + | gene.Posoc08g00360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 35,552.38 Da | 45.00 | 85.29 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 24 | 64 | 4.6E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 165 | 1.44E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 73 | 2.09E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 64 | 1.9E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 69 | 190 | 7.9E-11 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 64 | 11.113627 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01620.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_039145379.1 | F-box protein SKIP28 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9ZU90 | F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CYW2 | F-box protein SKIP28 OS=Phoenix dactylifera OX=42345 GN=LOC103721133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology