HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene.Posoc07g12730
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: Serine threonine-protein phosphatase 7 long form homolog
Maps and Mapping Data
Chromosome Start End Strand ID
Chr07 183089057 183090967 - gene.Posoc07g12730
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.26 49,590.16 Da 52.84 83.05 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10536 Plant mobile domain 10 235 4.1E-21 IPR019557
MobiDBLite mobidb-lite consensus disorder prediction 400 421 - -
MobiDBLite mobidb-lite consensus disorder prediction 397 443 - -
Coils Coil Coil 328 348 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052162545.1 protein MAIN-LIKE 1-like isoform X3 [Oryza glaberrima] 0
TrEMBL A0A843VDB4 PMD domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_026970 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Posidoniaceae Posidonia oceanica 11 gene.Posoc01g11930, gene.Posoc01g18890, gene.Posoc01g26630 ...
gene.Posoc01g30790, gene.Posoc02g06770, gene.Posoc02g20300, gene.Posoc02g20310, gene.Posoc03g25600, gene.Posoc07g12730, gene.Posoc09g01580, gene.Posoc09g05780
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.