Basic Information
Locus ID:
gene.Posoc07g10120
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 145536491 | 145598153 | - | gene.Posoc07g10120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 41,665.48 Da | 42.07 | 98.33 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 157 | 306 | 3.5E-38 | IPR013765 |
| Pfam | PF08423 | Rad51 | 111 | 151 | 8.2E-5 | IPR013632 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 107 | 307 | 4.44E-29 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 161 | 374 | 2.1E-44 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 105 | 160 | 1.5E-17 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 242 | 320 | 16.825291 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 253 | 261 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 202 | 231 | 9.3E-43 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 164 | 193 | 9.3E-43 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 250 | 278 | 9.3E-43 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 291 | 320 | 9.3E-43 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_010907253.1 | DNA repair protein recA homolog 2, mitochondrial isoform X2 [Elaeis guineensis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q2N8 | RecA OS=Zostera marina OX=29655 GN=ZOSMA_123G00480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology