Basic Information
Locus ID:
gene.Posoc07g07540
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 48061167 | 48067063 | + | gene.Posoc07g07540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 52,127.82 Da | 42.98 | 69.13 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 424 | 460 | 1.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 335 | 375 | 0.018 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 298 | 330 | 2.0E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 174 | 461 | 9.61E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 156 | 465 | 6.5E-122 | IPR015943 |
| SMART | SM00320 | WD40_4 | 291 | 330 | 2.2E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 333 | 375 | 0.0019 | IPR001680 |
| SMART | SM00320 | WD40_4 | 421 | 460 | 3.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 207 | 247 | 0.41 | IPR001680 |
| SMART | SM00320 | WD40_4 | 250 | 287 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 163 | 204 | 160.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 215 | 256 | 8.804123 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 428 | 461 | 14.184453 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 298 | 330 | 10.732868 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 298 | 339 | 13.282162 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 428 | 461 | 11.73468 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 447 | 461 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 121 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_008783451.1 | protein FIZZY-RELATED 1-like [Phoenix dactylifera] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BQT9 | protein FIZZY-RELATED 1-like OS=Phoenix dactylifera OX=42345 GN=LOC103702694 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology