Basic Information
Locus ID:
gene.Posoc07g06830
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 39349547 | 39350224 | + | gene.Posoc07g06830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 24,266.00 Da | 46.43 | 102.31 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 93 | 215 | 2.3E-17 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 93 | 212 | 4.53E-18 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 92 | 217 | 6.4E-28 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_009397776.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Musa acuminata subsp. malaccensis] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9Q3M0 | Beta-1,3-endoglucanase, family GH17 OS=Zostera marina OX=29655 GN=ZOSMA_10G00420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 7 | gene.Posoc02g00920, gene.Posoc02g00940, gene.Posoc05g17300 ... |