Basic Information
Locus ID:
gene.Posoc07g02150
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 6109188 | 6114707 | - | gene.Posoc07g02150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 41,467.52 Da | 43.38 | 77.93 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 304 | 351 | 6.8E-13 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 44 | 253 | 9.24E-20 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 301 | 358 | 1.25E-15 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 46 | 269 | 4.7E-9 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 299 | 355 | 1.2E-16 | - |
| SMART | SM00326 | SH3_2 | 300 | 355 | 2.3E-14 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 297 | 356 | 21.08246 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 181 | 208 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_020260707.1 | SH3 domain-containing protein 2-like [Asparagus officinalis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6V7QYZ5 | SH3 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS31226 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology