Basic Information
Locus ID:
gene.Posoc07g00920
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Cop9 signalosome complex subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 3073923 | 3083794 | - | gene.Posoc07g00920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 35,910.82 Da | 64.09 | 67.48 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02953 | Tim10/DDP family zinc finger | 171 | 209 | 2.6E-10 | IPR004217 |
| SUPERFAMILY | SSF144122 | Tim10-like | 170 | 210 | 3.92E-12 | IPR035427 |
| Gene3D | G3DSA:1.25.40.570 | - | 208 | 256 | 5.2E-11 | - |
| Gene3D | G3DSA:1.10.287.810 | Mitochondrial import inner membrane translocase subunit tim13 like domains | 162 | 207 | 4.8E-9 | IPR035427 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 299 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29530.1 | Tim10/DDP family zinc finger protein. Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. | 0 |
| RefSeq | XP_008643664.1 | uncharacterized protein LOC100282321 isoform X1 [Zea mays] | 0 |
| Q9ZW33 | Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6GE05 | Mitochondrial import inner membrane translocase subunit Tim10 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d012930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 37 | gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... |