Basic Information
Locus ID:
gene.Posoc07g00580
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 1789986 | 1792214 | + | gene.Posoc07g00580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 80,543.92 Da | 50.61 | 72.45 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 535 | 611 | 6.51113E-48 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 96 | 281 | 1.3E-51 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 542 | 587 | 1.6E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 541 | 607 | 1.06E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 530 | 615 | 5.1E-18 | IPR036638 |
| SMART | SM00353 | finulus | 544 | 593 | 2.5E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 538 | 587 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 548 | - | - |
| Coils | Coil | Coil | 584 | 611 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_010919958.1 | transcription factor MYC2 [Elaeis guineensis] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PBL1 | Transcription factor MYC2 OS=Zostera marina OX=29655 GN=ZOSMA_29G01200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology