halophFGD

Basic Information

Locus ID: gene.Posoc06g22130

Species & Taxonomic ID: Posidonia oceanica & 55489

Genome Assembly: GCA_037176725.1

Description: DNA repair protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	201164477	201167845	-	gene.Posoc06g22130

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.65	31,669.86 Da	45.24	67.75	-0.42

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	21	52	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	32	51	-	-

KEGG Pathway

KO Term:

K10803 (DNA-repair protein XRCC1)

Pathway:

ko03410 (Base excision repair) map03410 (Base excision repair)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G80420.4	BRCT domain-containing DNA repair protein.
RefSeq	XP_022150690.1	DNA-repair protein XRCC1 [Momordica charantia]
Swiss-Prot	Q24JK4	DNA-repair protein XRCC1 OS=Arabidopsis thaliana OX=3702 GN=XRCC1 PE=1 SV=1
TrEMBL	A0A0K9NZZ5	DNA repair protein XRCC1-like OS=Zostera marina OX=29655 GN=ZOSMA_46G00560 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Posidoniaceae	Posidonia oceanica	37	gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... gene.Posoc01g29480, gene.Posoc01g33290, gene.Posoc02g00010, gene.Posoc02g01630, gene.Posoc02g10450, gene.Posoc02g14150, gene.Posoc02g16790, gene.Posoc02g17140, gene.Posoc02g17150, gene.Posoc03g20350, gene.Posoc03g22380, gene.Posoc03g25910, gene.Posoc04g02750, gene.Posoc04g03060, gene.Posoc04g12880, gene.Posoc04g19770, gene.Posoc05g21170, gene.Posoc06g09400, gene.Posoc06g16150, gene.Posoc06g22130, gene.Posoc07g00920, gene.Posoc07g06820, gene.Posoc07g09250, gene.Posoc08g04280, gene.Posoc08g05080, gene.Posoc08g07430, gene.Posoc08g08080, gene.Posoc08g09780, gene.Posoc08g12200, gene.Posoc09g03610, gene.Posoc09g08200, gene.Posoc10g06970, gene.Posoc10g06980, gene.Posoc10g06990