Basic Information
Locus ID:
gene.Posoc06g17560
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 96377227 | 96378108 | - | gene.Posoc06g17560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 33,320.96 Da | 26.01 | 84.23 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 18 | 151 | 5.7258E-23 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 20 | 150 | 5.4E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 173 | 209 | 1.7E-9 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 3 | 219 | 2.52E-51 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 2 | 239 | 2.3E-84 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 152 | 236 | 2.3E-84 | - |
| SMART | SM00382 | AAA_5 | 16 | 153 | 3.8E-19 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 123 | 142 | - | IPR003960 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_006366648.1 | PREDICTED: uncharacterized protein LOC102581738 [Solanum tuberosum] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | M1BRP4 | ATP binding protein OS=Solanum tuberosum OX=4113 GN=102581738 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology