Basic Information
Locus ID:
gene.Posoc06g17000
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 93221582 | 93224221 | - | gene.Posoc06g17000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 68,025.90 Da | 52.62 | 93.92 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 323 | 568 | 7.7E-25 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.8E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 323 | 581 | 2.73E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 187 | 9.78E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 317 | 590 | 1.8E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 204 | 1.7E-24 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 643 | 25.135212 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 348 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 591 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 591 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68400.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_008813730.2 | probable leucine-rich repeat receptor-like protein kinase At1g68400 [Phoenix dactylifera] | 0 |
| Q9M9C5 | Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana OX=3702 GN=At1g68400 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IC49 | Receptor-kinase isolog OS=Cocos nucifera OX=13894 GN=COCNU_06G014270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_06G014270 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103724293 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno10g06320 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.3390, BH03.3663, CH03.3864 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0574000, gene-QOZ80_7BG0605190 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0132210.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040174, gene-QYE76_040579 |
| Poaceae | Oryza coarctata | 1 | Oco14G011420 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g38640.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G324200, gene-BS78_K063800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304514 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G003780, Chr24G010910, Chr27G013510, Chr28G010150 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G373400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG023590, gene_TRIDC2BG029500 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G185000.1, TraesCS2B02G222100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb325180_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-10530 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5409 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g24600, gene.Posoc06g17000 |