Basic Information
Locus ID:
gene.Posoc06g16550
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 90782242 | 90795852 | + | gene.Posoc06g16550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 112,012.39 Da | 37.38 | 90.45 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 702 | 964 | 2.68208E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 127 | 185 | 4.8E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 429 | 615 | 4.8E-40 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 699 | 962 | 1.1E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 294 | 353 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 100 | 381 | 1.24E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 965 | 6.74E-82 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 427 | 620 | 8.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 405 | 3.2E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 977 | 3.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 277 | 6.1E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 670 | 771 | 3.2E-34 | - |
| SMART | SM00220 | serkin_6 | 696 | 966 | 1.4E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 696 | 966 | 37.488327 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 318 | 341 | 7.057395 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 702 | 724 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56145.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_020103078.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Ananas comosus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5GB39 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109720402 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology