Basic Information
Locus ID:
gene.Posoc06g13140
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 66541167 | 66553900 | - | gene.Posoc06g13140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 41,466.26 Da | 37.46 | 72.08 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 309 | 357 | 5.9E-9 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 258 | 5.08E-25 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 296 | 362 | 1.97E-14 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 44 | 273 | 2.8E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 307 | 359 | 2.5E-14 | - |
| SMART | SM00326 | SH3_2 | 305 | 360 | 1.8E-10 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 302 | 361 | 17.652935 | IPR001452 |
| Coils | Coil | Coil | 149 | 176 | - | - |
| Coils | Coil | Coil | 186 | 213 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_038705579.1 | SH3 domain-containing protein 2-like [Tripterygium wilfordii] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A443NKT3 | SH3 domain-containing protein 2-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00772400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology