Basic Information
Locus ID:
gene.Posoc06g12820
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
EBF1
Description:
Ein3-binding F box protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 62235414 | 62236259 | + | gene.Posoc06g12820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 30,894.62 Da | 43.42 | 96.76 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 199 | 218 | 0.065 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 4 | 268 | 2.55E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 77 | 6.5E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 275 | 2.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 78 | 138 | 7.9E-6 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 31 | 56 | 470.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 248 | 273 | 47.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 143 | 168 | 23.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 170 | 195 | 0.094 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 5 | 30 | 3.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 222 | 247 | 330.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 86 | 111 | 440.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 112 | 137 | 19.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 196 | 220 | 2.1 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_010251723.1 | PREDICTED: EIN3-binding F-box protein 1-like [Nelumbo nucifera] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PR10 | F-box family protein OS=Zostera marina OX=29655 GN=ZOSMA_17G00680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology