Basic Information
Locus ID:
gene.Posoc06g10100
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 47785383 | 47788070 | + | gene.Posoc06g10100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 28,323.34 Da | 62.48 | 62.07 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 78 | 211 | 4.44162E-46 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 79 | 210 | 3.0E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 72 | 216 | 3.25E-44 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 65 | 225 | 2.4E-48 | IPR016135 |
| SMART | SM00212 | ubc_7 | 72 | 216 | 5.6E-47 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 68 | 216 | 40.535862 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 141 | 157 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 243 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.1 | ubiquitin-conjugating enzyme 5. | 0 |
| RefSeq | XP_008794268.1 | ubiquitin-conjugating enzyme E2 4-like [Phoenix dactylifera] | 0 |
| P42749 | Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7C919 | ubiquitin-conjugating enzyme E2 4-like OS=Phoenix dactylifera OX=42345 GN=LOC103710362 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology