halophFGD

Basic Information

Locus ID: gene.Posoc06g09400

Species & Taxonomic ID: Posidonia oceanica & 55489

Genome Assembly: GCA_037176725.1

Description: Mannosyltransferase (PIG-M)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	43980992	43989191	-	gene.Posoc06g09400

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.38	23,660.97 Da	73.00	68.39	-0.43

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF05007	Mannosyltransferase (PIG-M)	147	177	3.2E-6	IPR007704
Pfam	PF02953	Tim10/DDP family zinc finger	113	151	1.9E-11	IPR004217
SUPERFAMILY	SSF144122	Tim10-like	112	153	2.49E-13	IPR035427
Gene3D	G3DSA:1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	97	155	2.4E-14	IPR035427

Gene Ontology

Biological Process:

GO:0006506 (GPI anchor biosynthetic process)

Molecular Function:

Cellular Component:

GO:0016020 (membrane)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G29530.1	Tim10/DDP family zinc finger protein. Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.
RefSeq	XP_008643664.1	uncharacterized protein LOC100282321 isoform X1 [Zea mays]
Swiss-Prot	Q9ZW33	Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1
TrEMBL	B6T665	Mitochondrial import inner membrane translocase subunit Tim10 OS=Zea mays OX=4577 GN=100282321 PE=2 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Posidoniaceae	Posidonia oceanica	37	gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... gene.Posoc01g29480, gene.Posoc01g33290, gene.Posoc02g00010, gene.Posoc02g01630, gene.Posoc02g10450, gene.Posoc02g14150, gene.Posoc02g16790, gene.Posoc02g17140, gene.Posoc02g17150, gene.Posoc03g20350, gene.Posoc03g22380, gene.Posoc03g25910, gene.Posoc04g02750, gene.Posoc04g03060, gene.Posoc04g12880, gene.Posoc04g19770, gene.Posoc05g21170, gene.Posoc06g09400, gene.Posoc06g16150, gene.Posoc06g22130, gene.Posoc07g00920, gene.Posoc07g06820, gene.Posoc07g09250, gene.Posoc08g04280, gene.Posoc08g05080, gene.Posoc08g07430, gene.Posoc08g08080, gene.Posoc08g09780, gene.Posoc08g12200, gene.Posoc09g03610, gene.Posoc09g08200, gene.Posoc10g06970, gene.Posoc10g06980, gene.Posoc10g06990