Basic Information
Locus ID:
gene.Posoc06g08640
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 41725856 | 41750518 | + | gene.Posoc06g08640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 108,439.34 Da | 40.31 | 81.76 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 759 | 914 | 2.4998E-62 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 319 | 913 | 3.0E-85 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 41 | 140 | 1.3E-23 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 16 | 139 | 1.83E-25 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 317 | 916 | 1.53E-111 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 309 | 538 | 1.1E-67 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 651 | 922 | 5.2E-59 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 12 | 154 | 5.4E-31 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 155 | 242 | 3.1E-6 | - |
| SMART | SM00695 | dusp | 37 | 143 | 3.0E-24 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 140 | 18.841478 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 319 | 916 | 56.969334 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 858 | 875 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 320 | 335 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_010908130.1 | ubiquitin carboxyl-terminal hydrolase 9 [Elaeis guineensis] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P3D1 | Ubiquitin carboxyl-terminal hydrolase OS=Zostera marina OX=29655 GN=ZOSMA_44G01270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology