Basic Information
Locus ID:
gene.Posoc06g08500
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
5' nucleotidase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 41161829 | 41168658 | + | gene.Posoc06g08500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 27,037.39 Da | 44.97 | 83.33 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05761 | 5' nucleotidase family | 78 | 122 | 4.3E-15 | IPR008380 |
| Pfam | PF05761 | 5' nucleotidase family | 129 | 195 | 1.1E-15 | IPR008380 |
| SUPERFAMILY | SSF56784 | HAD-like | 128 | 196 | 4.53E-14 | IPR036412 |
| SUPERFAMILY | SSF56784 | HAD-like | 74 | 122 | 8.24E-12 | IPR036412 |
| Gene3D | G3DSA:3.40.50.1000 | - | 73 | 198 | 1.9E-20 | IPR023214 |
| Coils | Coil | Coil | 39 | 59 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23890.1 | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase. | 0 |
| RefSeq | XP_040246338.1 | 5'-nucleotidase domain-containing protein DDB_G0275467 isoform X2 [Aegilops tauschii subsp. strangulata] | 0 |
| Q75K12 | 5'-nucleotidase domain-containing protein DDB_G0275467 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275467 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1E5VYH7 | 5'-nucleotidase domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0008821 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC113461393 |
| Poaceae | Oryza coarctata | 1 | Oco18G005310 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_K069800, gene-BS78_K248600 |
| Posidoniaceae | Posidonia oceanica | 4 | gene.Posoc03g18720, gene.Posoc06g07640, gene.Posoc06g08500 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G2359 |