Basic Information
Locus ID:
gene.Posoc06g08330
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 40664923 | 40670431 | + | gene.Posoc06g08330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 35,464.85 Da | 47.90 | 66.99 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 14 | 185 | 4.7E-79 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 7 | 109 | 3.8E-44 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 110 | 183 | 1.3E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 289 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_010940943.1 | ubiquitin fusion degradation protein 1 homolog [Elaeis guineensis] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PGI3 | Ubiquitin fusion degradation protein OS=Zostera marina OX=29655 GN=ZOSMA_26G00790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology