Basic Information
Locus ID:
gene.Posoc06g06240
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 32314580 | 32315880 | - | gene.Posoc06g06240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 44,431.76 Da | 39.86 | 77.16 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 230 | 272 | 8.4E-8 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 122 | 170 | 1.1E-9 | IPR025610 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 17 | 119 | 1.4E-10 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 231 | 287 | 2.49E-13 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 220 | 288 | 2.8E-12 | IPR036638 |
| SMART | SM00353 | finulus | 229 | 278 | 7.5E-12 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 223 | 272 | 13.731841 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 209 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_039121779.1 | transcription factor MYC3-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9FIP9 | Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843V060 | BHLH domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_024376 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology