Basic Information
Locus ID:
gene.Posoc06g06230
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 32299241 | 32300497 | - | gene.Posoc06g06230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 46,174.80 Da | 48.06 | 80.69 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 17 | 180 | 4.7E-34 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 248 | 293 | 3.8E-9 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 247 | 308 | 1.01E-16 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 223 | 309 | 1.0E-14 | IPR036638 |
| SMART | SM00353 | finulus | 250 | 299 | 1.2E-14 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 244 | 293 | 15.510093 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 255 | - | - |
| Coils | Coil | Coil | 290 | 310 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_008803328.2 | transcription factor MYC2-like [Phoenix dactylifera] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843V060 | BHLH domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_024376 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology