Basic Information
Locus ID:
gene.Posoc06g05950
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 31515824 | 31534797 | + | gene.Posoc06g05950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 97,372.38 Da | 70.88 | 59.71 | -1.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 800 | 840 | 1.63431E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 798 | 845 | 8.3E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 800 | 846 | 4.49E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 779 | 851 | 5.4E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 801 | 840 | 10.77793 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 203 | - | - |
| Coils | Coil | Coil | 730 | 750 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_019705265.1 | uncharacterized protein LOC105042919 [Elaeis guineensis] | 0 |
| TrEMBL | A0A0K9PGB9 | RING/U-box superfamily protein OS=Zostera marina OX=29655 GN=ZOSMA_26G00360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology