Basic Information
Locus ID:
gene.Posoc06g05800
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 31150366 | 31168087 | + | gene.Posoc06g05800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 97,961.22 Da | 50.89 | 84.98 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 806 | 847 | 1.2495E-22 | - |
| CDD | cd01989 | STK_N | 86 | 239 | 1.63345E-47 | - |
| Pfam | PF00069 | Protein kinase domain | 518 | 768 | 3.2E-42 | IPR000719 |
| Pfam | PF04564 | U-box domain | 802 | 872 | 2.4E-19 | IPR003613 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 114 | 204 | 1.88E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 494 | 771 | 5.93E-68 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 790 | 870 | 2.38E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 493 | 587 | 1.0E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 789 | 2.6E-46 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 800 | 873 | 3.3E-26 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 75 | 205 | 5.4E-6 | IPR014729 |
| SMART | SM00220 | serkin_6 | 515 | 780 | 3.0E-32 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 805 | 868 | 4.9E-27 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 515 | 786 | 34.279911 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 801 | 873 | 34.022327 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 521 | 542 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 633 | 645 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| Coils | Coil | Coil | 382 | 493 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_010918573.1 | U-box domain-containing protein 33 [Elaeis guineensis] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9R153 | U-box domain-containing protein 33 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105042905 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology