HalophFGD

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Basic Information
Locus ID: gene.Posoc06g05620
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr06 30169946 30171199 - gene.Posoc06g05620
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.70 44,823.30 Da 49.19 77.78 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 44 82 3.0E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 43 88 2.88E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 25 137 2.9E-6 -
SMART SM00256 fbox_2 44 84 2.7E-6 IPR001810
Coils Coil Coil 19 39 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G32420.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_019162780.1 PREDICTED: F-box protein At3g07870-like [Ipomoea nil] 0
Swiss-Prot Q9LQL5 Putative F-box protein At1g32420 OS=Arabidopsis thaliana OX=3702 GN=At1g32420 PE=4 SV=1 0
TrEMBL A0A2P6SF74 Putative F-box domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0347171 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Posidoniaceae Posidonia oceanica 12 gene.Posoc01g26710, gene.Posoc02g34360, gene.Posoc03g11620 ...
gene.Posoc03g15500, gene.Posoc04g10930, gene.Posoc04g23040, gene.Posoc04g23050, gene.Posoc04g23560, gene.Posoc06g00240, gene.Posoc06g05620, gene.Posoc10g02470, gene.Posoc10g07470
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_12_RagTag.445
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.