Basic Information
Locus ID:
gene.Posoc06g04060
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 24739512 | 24747752 | - | gene.Posoc06g04060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 26,375.38 Da | 23.33 | 75.25 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 182 | 239 | 1.41174E-10 | IPR002048 |
| CDD | cd00051 | EFh | 85 | 141 | 4.16592E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 181 | 239 | 1.8E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 84 | 141 | 3.6E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 84 | 141 | 1.38E-10 | IPR011992 |
| SUPERFAMILY | SSF47473 | EF-hand | 181 | 239 | 1.41E-12 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 181 | 240 | 6.5E-15 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 84 | 141 | 1.7E-12 | - |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 214 | 240 | 12.560727 | IPR002048 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32250.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_024994293.1 | probable calcium-binding protein CML11 [Cynara cardunculus var. scolymus] | 0 |
| Q9AWK2 | Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RI76 | Calcium-binding protein CML11 OS=Carpinus fangiana OX=176857 GN=FH972_016041 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology