Basic Information
Locus ID:
gene.Posoc06g00240
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 914508 | 915412 | - | gene.Posoc06g00240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 29,958.41 Da | 47.02 | 98.79 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 51 | 6.1E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 70 | 1.83E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 91 | 1.1E-7 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 5.1E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 114 | 250 | 2.4E-12 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 56 | 9.153042 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67130.1 | F-box family protein. | 0 |
| RefSeq | XP_030451149.1 | F-box/kelch-repeat protein At3g06240-like [Syzygium oleosum] | 0 |
| TrEMBL | A0A5J5A494 | F-box domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_011259 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 12 | gene.Posoc01g26710, gene.Posoc02g34360, gene.Posoc03g11620 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.445 |