HalophFGD

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Basic Information
Locus ID: gene.Posoc05g23180
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: Pyruvate kinase
Maps and Mapping Data
Chromosome Start End Strand ID
Chr05 251327111 251344653 - gene.Posoc05g23180
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.68 66,771.37 Da 36.69 96.54 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00224 Pyruvate kinase, barrel domain 110 455 1.9E-93 IPR015793
Pfam PF02887 Pyruvate kinase, alpha/beta domain 475 602 2.4E-23 IPR015795
SUPERFAMILY SSF50800 PK beta-barrel domain-like 176 266 3.14E-7 IPR011037
SUPERFAMILY SSF51621 Phosphoenolpyruvate/pyruvate domain 85 455 1.5E-75 IPR015813
SUPERFAMILY SSF52935 PK C-terminal domain-like 438 600 1.96E-22 IPR036918
Gene3D G3DSA:3.20.20.60 - 110 450 2.1E-148 IPR040442
Gene3D G3DSA:3.40.1380.20 - 451 593 2.1E-148 IPR036918
Gene3D G3DSA:2.40.33.10 - 176 282 2.1E-148 IPR015806
TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 110 596 7.9E-110 IPR001697
PRINTS PR01050 Pyruvate kinase family signature 409 427 1.1E-43 IPR001697
PRINTS PR01050 Pyruvate kinase family signature 301 315 1.1E-43 IPR001697
PRINTS PR01050 Pyruvate kinase family signature 333 359 1.1E-43 IPR001697
PRINTS PR01050 Pyruvate kinase family signature 428 444 1.1E-43 IPR001697
PRINTS PR01050 Pyruvate kinase family signature 360 384 1.1E-43 IPR001697
PRINTS PR01050 Pyruvate kinase family signature 165 181 1.1E-43 IPR001697
Gene Ontology
Biological Process:
GO:0006096 (glycolytic process)
Molecular Function:
GO:0000287 (magnesium ion binding) GO:0003824 (catalytic activity) GO:0004743 (pyruvate kinase activity) GO:0030955 (potassium ion binding)
KEGG Pathway
KO Term:
K00873 (pyruvate kinase [EC:2.7.1.40])
Pathway:
ko00010 (Glycolysis / Gluconeogenesis) map00010 (Glycolysis / Gluconeogenesis) ko00230 (Purine metabolism) map00230 (Purine metabolism) ko00620 (Pyruvate metabolism) map00620 (Pyruvate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01200 (Carbon metabolism) map01200 (Carbon metabolism) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids)
Module:
M00001 (Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate) M00002 (Glycolysis, core module involving three-carbon compounds) M00049 (Adenine ribonucleotide biosynthesis, IMP => ADP,ATP) M00050 (Guanine ribonucleotide biosynthesis, IMP => GDP,GTP)
Reaction:
R00200 (ATP + Pyruvate <=> ADP + Phosphoenolpyruvate) R00430 (GTP + Pyruvate <=> GDP + Phosphoenolpyruvate) R01138 (dATP + Pyruvate <=> dADP + Phosphoenolpyruvate) R01858 (dGTP + Pyruvate <=> dGDP + Phosphoenolpyruvate) R02320 (Nucleoside triphosphate + Pyruvate <=> NDP + Phosphoenolpyruvate)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G52990.1 Pyruvate kinase family protein. 0
RefSeq XP_039125343.1 LOW QUALITY PROTEIN: pyruvate kinase 1, cytosolic-like [Dioscorea cayenensis subsp. rotundata] 0
Swiss-Prot B8BJ39 Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1 0
TrEMBL A0A8B7BIU4 Pyruvate kinase OS=Phoenix dactylifera OX=42345 GN=LOC103697737 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 6 jg14503, jg14504, jg15028, jg31985, jg32659, jg3550
Aizoaceae Mesembryanthemum crystallinum 2 gene_14392, gene_4596
Amaranthaceae Atriplex hortensis 3 Ah007026, Ah022120, Ah030809
Amaranthaceae Beta vulgaris 2 BVRB_3g062650, BVRB_7g160680
Amaranthaceae Salicornia bigelovii 5 Sbi_jg27491, Sbi_jg33228, Sbi_jg35918, Sbi_jg59711 ...
Sbi_jg63766
Amaranthaceae Salicornia europaea 2 Seu_jg24163, Seu_jg7943
Amaranthaceae Suaeda aralocaspica 3 GOSA_00005650, GOSA_00013019, GOSA_00024114
Amaranthaceae Suaeda glauca 5 Sgl02246, Sgl21440, Sgl68668, Sgl71366, Sgl74959
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000000151, gene:ENSEOMG00000029320 ...
gene:ENSEOMG00000036612, gene:ENSEOMG00000039646, gene:ENSEOMG00000043750, gene:ENSEOMG00000043781
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.3AG0022640, CQ.Regalona.r1.3BG0023370 ...
CQ.Regalona.r1.4AG0015520, CQ.Regalona.r1.7AG0019400, CQ.Regalona.r1.7BG0022000
Anacardiaceae Pistacia vera 3 pistato.v30170160, pistato.v30274520, pistato.v30295450
Apiaceae Apium graveolens 3 Ag11G04553, Ag2G02950, Ag3G02621
Arecaceae Cocos nucifera 3 COCNU_03G001910, scaffold004526G000010 ...
scaffold007042G000010
Arecaceae Phoenix dactylifera 3 gene-LOC103696956, gene-LOC103697737, gene-LOC103704838
Asparagaceae Asparagus officinalis 2 AsparagusV1_02.882.V1.1, AsparagusV1_09.271.V1.1
Asteraceae Flaveria trinervia 5 Ftri11G31230, Ftri12G08362, Ftri18G02215, Ftri6G04778 ...
Ftri9G22291
Brassicaceae Arabidopsis thaliana 2 AT2G36580.1, AT3G52990.1
Brassicaceae Eutrema salsugineum 2 Thhalv10010288m.g.v1.0, Thhalv10016506m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp4g18870.v2.2, Sp5g09330.v2.2
Brassicaceae Brassica nigra 3 BniB06g058090.2N, BniB06g066250.2N, BniB08g067380.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq02G1515, Ceq05G1171
Casuarinaceae Casuarina glauca 3 Cgl02G1570, Cgl05G1182, Cgl05G1184
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno04g01240, gene.Cymno07g10330, gene.Cymno08g03420
Dunaliellaceae Dunaliella salina 3 Dusal.0164s00012.v1.0, Dusal.0444s00010.v1.0 ...
Dusal.1013s00004.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate06g11500, gene.Thate06g11840, gene.Thate08g08560
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-8580
Nitrariaceae Nitraria sibirica 2 evm.TU.LG01.2155, evm.TU.LG02.1190
Plantaginaceae Plantago ovata 3 Pov_00004952, Pov_00006274, Pov_00040226
Plumbaginaceae Limonium bicolor 4 Lb2G09778, Lb3G16095, Lb3G19161, Lb3G19295
Poaceae Echinochloa crus-galli 8 AH04.273, AH04.990, AH05.182, BH04.260, BH04.939, BH05.210 ...
CH04.1084, CH05.267
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_5AG0381270, gene-QOZ80_5BG0428320 ...
gene-QOZ80_9AG0674470, gene-QOZ80_9AG0678490, gene-QOZ80_9BG0698280, gene-QOZ80_9BG0702120
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.4HG0345500.1, HORVU.MOREX.r3.5HG0459370.1
Poaceae Lolium multiflorum 3 gene-QYE76_003144, gene-QYE76_064297, gene-QYE76_064309
Poaceae Oryza coarctata 6 Oco21G001040, Oco21G003200, Oco22G001870, Oco22G004000 ...
Oco23G001670, Oco24G001210
Poaceae Oryza sativa 3 LOC_Os11g05110.1, LOC_Os11g10980.1, LOC_Os12g05110.1
Poaceae Paspalum vaginatum 3 gene-BS78_05G046700, gene-BS78_08G022200 ...
gene-BS78_10G045000
Poaceae Puccinellia tenuiflora 4 Pt_Chr0103974, Pt_Chr0703114, Pt_Chr0703153, Pt_Chr0704216
Poaceae Sporobolus alterniflorus 8 Chr04G022040, Chr06G023760, Chr07G021430, Chr17G010520 ...
Chr19G012030, Chr27G003930, Chr31G000890, Chr31G003340
Poaceae Thinopyrum elongatum 2 Tel3E01G781500, Tel5E01G237000
Poaceae Triticum dicoccoides 5 gene_TRIDC1BG017820, gene_TRIDC4AG032330 ...
gene_TRIDC4BG016570, gene_TRIDC5AG022750, gene_TRIDC5BG023180
Poaceae Triticum aestivum 6 TraesCS4A02G203300.1, TraesCS4B02G107200.4 ...
TraesCS4D02G104100.1, TraesCS5A02G131100.1, TraesCS5B02G131000.1, TraesCS5D02G138800.1
Poaceae Zea mays 3 Zm00001eb168480_P001, Zm00001eb196650_P001 ...
Zm00001eb406450_P001
Poaceae Zoysia japonica 3 nbis-gene-25666, nbis-gene-40164, nbis-gene-46368
Poaceae Zoysia macrostachya 4 Zma_g17558, Zma_g17777, Zma_g24725, Zma_g25493
Portulacaceae Portulaca oleracea 8 evm.TU.LG03.2283, evm.TU.LG07.405, evm.TU.LG08.1498 ...
evm.TU.LG15.535, evm.TU.LG16.1163, evm.TU.LG17.1331, evm.TU.LG20.1379, evm.TU.LG22.390
Posidoniaceae Posidonia oceanica 2 gene.Posoc05g15490, gene.Posoc05g23180
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_10_RagTag.1142, evm.TU.Scaffold_2_RagTag.954 ...
evm.TU.Scaffold_1_RagTag.1472
Rhizophoraceae Carallia pectinifolia 3 nbisL1-mrna-13437, nbisL1-mrna-4253, nbisL1-mrna-6124
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-1040, nbisL1-mrna-4535
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-21782, nbisL1-mrna-3984, nbisL1-mrna-3987
Rhizophoraceae Kandelia candel 3 evm.TU.utg000004l.323, evm.TU.utg000009l.927 ...
evm.TU.utg000016l.488
Rhizophoraceae Kandelia obovata 3 Maker00003873, Maker00006164, Maker00016410
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-12584, nbisL1-mrna-16312, nbisL1-mrna-7662
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-21418, nbisL1-mrna-415, nbisL1-mrna-5785
Salicaceae Populus euphratica 3 populus_peu06154, populus_peu11596, populus_peu20012
Solanaceae Lycium barbarum 2 gene-LOC132607154, gene-LOC132629927
Solanaceae Solanum chilense 2 SOLCI000086100, SOLCI003915600
Solanaceae Solanum pennellii 3 gene-LOC107002489, gene-LOC107004573, gene-LOC107029266
Tamaricaceae Reaumuria soongarica 4 STRG.1047_chr01_+, STRG.21195_chr08_-, STRG.27523_chr04_- ...
STRG.32234_chr09_-
Tamaricaceae Tamarix chinensis 4 TC00000028, TC02G1398, TC02G2553, TC12G1933
Zosteraceae Zostera marina 4 Zosma02g00810.v3.1, Zosma02g04450.v3.1, Zosma04g16420.v3.1 ...
Zosma05g03520.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.