Basic Information
Locus ID:
gene.Posoc05g18910
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 239466919 | 239470293 | - | gene.Posoc05g18910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 64,918.27 Da | 53.40 | 73.42 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 337 | 563 | 1.2E-75 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 85 | 296 | 1.8E-73 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 92 | 566 | 2.2E-234 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 355 | 529 | 2.2E-234 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 174 | 208 | 9.361008 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 209 | 243 | 8.61564 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 57 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_038989250.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Phoenix dactylifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PZC3 | ribonuclease P OS=Zostera marina OX=29655 GN=ZOSMA_146G00650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology