Basic Information
Locus ID:
gene.Posoc05g16590
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Lecithin retinol acyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 226263449 | 226264732 | - | gene.Posoc05g16590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 47,752.02 Da | 45.47 | 102.76 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 10 | 53 | 8.524E-21 | - |
| Pfam | PF04564 | U-box domain | 6 | 78 | 3.1E-20 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 100 | 404 | 5.04E-19 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 3 | 83 | 2.67E-28 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 84 | 8.0E-29 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 89 | 413 | 3.4E-15 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 9 | 73 | 1.1E-28 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 5 | 80 | 37.507534 | IPR003613 |
| Coils | Coil | Coil | 114 | 134 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52450.1 | plant U-box 22. Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. | 0 |
| RefSeq | XP_029117734.1 | E3 ubiquitin-protein ligase PUB22-like [Elaeis guineensis] | 0 |
| Q9SVC6 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834Z180 | RING-type E3 ubiquitin transferase OS=Tetracentron sinense OX=13715 GN=HHK36_019397 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology