Basic Information
Locus ID:
gene.Posoc05g15950
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 220288652 | 220291588 | - | gene.Posoc05g15950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 28,465.52 Da | 41.08 | 84.14 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 36 | 76 | 1.6E-6 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 34 | 80 | 9.71E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 32 | 82 | 4.8E-11 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 265 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72220.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_019709195.1 | E3 ubiquitin-protein ligase ATL4-like [Elaeis guineensis] | 0 |
| Q8LFY8 | RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0PP24 | E3 ubiquitin-protein ligase ATL4-like OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105053903 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene.Posoc05g15950.