Basic Information
Locus ID:
gene.Posoc05g15500
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 208374240 | 208376201 | - | gene.Posoc05g15500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 61,198.91 Da | 72.37 | 51.60 | -1.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 115 | 263 | 6.3E-20 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 118 | 213 | 1.7E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 112 | - | - |
| Coils | Coil | Coil | 440 | 460 | - | - |
| Coils | Coil | Coil | 468 | 488 | - | - |
| Coils | Coil | Coil | 28 | 48 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_031252275.1 | lateral signaling target protein 2 homolog [Pistacia vera] | 0 |
| TrEMBL | A0A0K9PVS6 | Sequence-specific DNA binding transcription factor OS=Zostera marina OX=29655 GN=ZOSMA_166G00570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology