Basic Information
Locus ID:
gene.Posoc05g14260
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Alpha mannosidase, middle domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 192134181 | 192176439 | - | gene.Posoc05g14260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 120,440.92 Da | 47.87 | 82.75 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 96 | 372 | 0.0 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 413 | 505 | 5.5E-21 | IPR015341 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 97 | 408 | 1.1E-93 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 956 | 1059 | 7.4E-8 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 660 | 872 | 2.7E-43 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 514 | 1063 | 7.85E-134 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 85 | 410 | 3.72E-106 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 412 | 507 | 6.54E-29 | IPR028995 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 456 | 512 | 1.4E-22 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 96 | 376 | 7.7E-121 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 377 | 455 | 1.1E-30 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 940 | 1066 | 1.0E-32 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 533 | 657 | 6.6E-30 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 658 | 920 | 1.8E-89 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 413 | 487 | 7.0E-24 | IPR015341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 48 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010929675.1 | alpha-mannosidase At3g26720 [Elaeis guineensis] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1Z0M3 | Alpha-mannosidase (Fragment) OS=Anthurium amnicola OX=1678845 GN=MAN2B1_31 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology